Sources

Mondo uses the following ontologies as sources or for cross-references (xrefs)/alignments.

Source ID Space/URI Prefix Role Website
OMIM Phenotypes OMIM Source www.omim.org
OMIM Phenotypic Series OMIMPS Source www.omim.org
Orphanet Orpha Source https://www.orpha.net/consor/cgi-bin/index.php
SNOMED (disorder subset) SCTID xref/Alignments www.snomed.org
National Cancer Institute Thesaurus (disease/disorder subset) NCIT Source https://ncit.nci.nih.gov/ncitbrowser/
Genetic and Rare Diseases Information Center GARD Source https://rarediseases.info.nih.gov/
Medical Subject Headings MESH xref/Alignments https://id.nlm.nih.gov/mesh/
Unified Medical Language System UMLS xref/Alignments https://www.nlm.nih.gov/research/umls/index.html
ICD - ICD-9 - International Classification of Diseases ICD9 xref/Alignments https://www.cdc.gov/nchs/icd/icd9.htm
ICD - ICD-10 - International Classification of Diseases ICD10 xref/Alignments https://www.cdc.gov/nchs/icd/icd10cm.htm
Experimental Factor Ontology EFO xref/Alignments* https://www.ebi.ac.uk/efo/
Disease Ontology DO Source http://www.obofoundry.org/ontology/doid.html
Mental Functioning Ontology MF Source http://www.obofoundry.org/ontology/mf.html
Columbia Open Health Data COHD xref/Alignments http://cohd.io/
MedGen MEDGEN xref/Alignments https://www.ncbi.nlm.nih.gov/medgen/
Ontology for General Medical Science OGMS xref/Alignments https://github.com/OGMS/ogms
Medical Dictionary for Regulatory Activities MeDRA xref/Alignments https://www.meddra.org/
OncoTree ONCOTREE xref/Alignments http://oncotree.mskcc.org/#/home

*historic